Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904939.1_cds_XP_016455038.1_49005
CDS Infomation

[gene=LOC107779184] [db_xref=GeneID:107779184] [protein=putative E3 ubiquitin-protein ligase XBAT31] [protein_id=XP_016455038.1] [location=join(47035..47214,47302..47361,47596..47667,47835..47956,48037..48177,48293..48400,48614..48863,49074..49463)] [gbkey=CDS]
Sequence

ATGGGTCAGGGACTCAGTTGTGGAACAAGTGATGACCATGGGTTATTCAGTGCTGTTCAG
TGTGGTGACGTGGAGACTGTGAAGACTCTGCTGGAGAGAAACTCGAGTCTTGTTCATCGT
TCTAGGGTTTATGATCGCCAGTCTGCTTTACATATTGCTGCTGCCAATGGTCAAGTTGAG
GTTGTTTCTATGCTTATAGACCAGTCCGTCAATCCTGATCTATTGAATCGGTATAAGCAG
ACTCCATTGATGCTGGCAGCCATGCACGGGAAGCTCTCTTGTGTGCAAAAGCTTATTGAA
GCAGGGGCTAATATTTTGATGTTTGATTCGCTTAATGGAAGAACATGCTTGCACTATGCT
GCCTATTATGGGCACTCTGATTGTCTCAAAGAAATTCTTTCTGCTGCTCGGACATCTCAT
GTTGCATCTTCCTGGGGATATGCCCGGTTTGTGAACGTTAAAGATGGTAAGGGCGCAACT
CCTTTGCACTTAGCAGCACGTCAAAGACGGCCTGAATGTGTTCATATTTTACTGGACAAT
GGTGCTTTGGTCTATGCTTCAACTGGTGAATACGGTTTCCCCGGTAGCTCACCACTTCAT
TTGGCTGCAAGAGCTGGTTCTCTTGATTGCATCCGCGAATTGTTAGCCTGGGGTGCAGAT
CGATCACACAGAGATGATTCAGGGCGAATACCATTCACAGTTGCTTTAAGATACAAACAT
GGTGCGTGCGCAGTTTTGCTGAATCCTTCATCCGCAGAGCCTCTTGTCTGGCCATCGTCA
TTGAAGTTCGTCAGTGAGCTCAATGAAGAGGCAAAGTCTTTGCTAGAACGTACCCTGATG
GAGGCTAACAAGGAGAGGGAAAATAACATCTTAAAAGGAACAGCTTATTCGCCAATCAAT
TCTGATGATGGGATGGATGACAATATCTCTGAGGTGAGTGATACAGAAGTTTGTTGTATA
TGCATTGATCAATTATGCATGATTCAGGTGCAGGACTGCGGGCACCAGATGTGTGCACAT
TGCATACTGGCCTTGTGCTGTCATAGCAAGCCTAATACTAGTACAACTAGTCCTACCGAA
CCTCTGTGTCCATTCTGCCGTAGTAAAATTGTACAATTGCAAGTTATCAAGTTTGAAAAG
GATGAAGACACAAACCATGATAACTACTCTTCCAAGATTAGGAAGTCTAGGAGGTCAAGA
AACTTAAGCGAGGGCAGTAGTAGTTTTAAGAGCTTATCTGCAGTGAGATCTTTTGGTAAA
ATGACTGGTCGTGGTTCGGGTAGGATTGCTGCTGAAAACGAACATATTGATAAAAGCCAA
TAA

Peptide Sequence

PEP ID

XP_016455038.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tabacum]
Sequence

MGQGLSCGTSDDHGLFSAVQCGDVETVKTLLERNSSLVHRSRVYDRQSALHIAAANGQVE
VVSMLIDQSVNPDLLNRYKQTPLMLAAMHGKLSCVQKLIEAGANILMFDSLNGRTCLHYA
AYYGHSDCLKEILSAARTSHVASSWGYARFVNVKDGKGATPLHLAARQRRPECVHILLDN
GALVYASTGEYGFPGSSPLHLAARAGSLDCIRELLAWGADRSHRDDSGRIPFTVALRYKH
GACAVLLNPSSAEPLVWPSSLKFVSELNEEAKSLLERTLMEANKERENNILKGTAYSPIN
SDDGMDDNISEVSDTEVCCICIDQLCMIQVQDCGHQMCAHCILALCCHSKPNTSTTSPTE
PLCPFCRSKIVQLQVIKFEKDEDTNHDNYSSKIRKSRRSRNLSEGSSSFKSLSAVRSFGK
MTGRGSGRIAAENEHIDKSQ

Transcript Sequence

Gene sequence data has not been registered.